Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1aO08602 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Raet1aO08602 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.3■□□□□ 0.2
Raet1aO08602 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1aO08602 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1aO08602 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.3■□□□□ 0.2
Raet1aO08602 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1aO08602 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1aO08602 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Raet1aO08602 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1aO08602 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.29■□□□□ 0.2
Raet1aO08602 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.29■□□□□ 0.2
Raet1aO08602 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Gm26571-201ENSMUST00000181399 666 ntBASIC16.29■□□□□ 0.2
Raet1aO08602 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.29■□□□□ 0.2
Raet1aO08602 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.29■□□□□ 0.2
Raet1aO08602 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Raet1aO08602 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Raet1aO08602 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Raet1aO08602 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Raet1aO08602 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.28■□□□□ 0.2
Raet1aO08602 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Raet1aO08602 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Raet1aO08602 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Raet1aO08602 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Raet1aO08602 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Raet1aO08602 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Raet1aO08602 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.27■□□□□ 0.2
Raet1aO08602 Gm8495-201ENSMUST00000188740 694 ntBASIC16.27■□□□□ 0.2
Raet1aO08602 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Raet1aO08602 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Raet1aO08602 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Raet1aO08602 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Raet1aO08602 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Raet1aO08602 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.26■□□□□ 0.19
Raet1aO08602 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Raet1aO08602 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Raet1aO08602 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Raet1aO08602 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Gm10849-201ENSMUST00000100397 618 ntBASIC16.25■□□□□ 0.19
Raet1aO08602 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Raet1aO08602 Gm42569-201ENSMUST00000200539 472 ntBASIC16.25■□□□□ 0.19
Raet1aO08602 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.25■□□□□ 0.19
Raet1aO08602 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.25■□□□□ 0.19
Raet1aO08602 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Raet1aO08602 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.24■□□□□ 0.19
Raet1aO08602 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Raet1aO08602 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.24■□□□□ 0.19
Raet1aO08602 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Raet1aO08602 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Raet1aO08602 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms