Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Gm28659-201ENSMUST00000188013 759 ntBASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Gm38027-201ENSMUST00000192315 235 ntBASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.72■□□□□ 0.59
Ccdc188F6WEU2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc188F6WEU2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Gm9013-201ENSMUST00000132939 882 ntBASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc188F6WEU2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc188F6WEU2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Gm27357-201ENSMUST00000183754 135 ntBASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Gm7063-201ENSMUST00000186840 981 ntBASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc188F6WEU2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Gm13884-201ENSMUST00000118103 829 ntBASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Mir6349-201ENSMUST00000184059 97 ntBASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc188F6WEU2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Gm16061-201ENSMUST00000122167 857 ntBASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc188F6WEU2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms