Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc149F6V035 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc149F6V035 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc149F6V035 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc149F6V035 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc149F6V035 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc149F6V035 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc149F6V035 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc149F6V035 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc149F6V035 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Gm10698-201ENSMUST00000182663 604 ntBASIC18.65■□□□□ 0.58
Ccdc149F6V035 Mir6982-201ENSMUST00000184354 68 ntBASIC18.65■□□□□ 0.58
Ccdc149F6V035 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc149F6V035 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc149F6V035 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc149F6V035 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc149F6V035 Iqck-206ENSMUST00000208658 2891 ntBASIC18.64■□□□□ 0.58
Ccdc149F6V035 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc149F6V035 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc149F6V035 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc149F6V035 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.62■□□□□ 0.57
Ccdc149F6V035 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc149F6V035 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.62■□□□□ 0.57
Ccdc149F6V035 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc149F6V035 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Mir7071-201ENSMUST00000184847 69 ntBASIC18.61■□□□□ 0.57
Ccdc149F6V035 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Zfp783-201ENSMUST00000095946 670 ntBASIC18.61■□□□□ 0.57
Ccdc149F6V035 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc149F6V035 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms