Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhb9E9Q5G2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Gm2399-201ENSMUST00000104944 225 ntBASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb9E9Q5G2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb9E9Q5G2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb9E9Q5G2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb9E9Q5G2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhb9E9Q5G2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.7■■□□□ 1.06
Pcdhb9E9Q5G2 Gm27275-201ENSMUST00000184318 272 ntBASIC21.7■■□□□ 1.06
Pcdhb9E9Q5G2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdhb9E9Q5G2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb9E9Q5G2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb9E9Q5G2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb9E9Q5G2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb9E9Q5G2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb9E9Q5G2 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.68■■□□□ 1.06
Pcdhb9E9Q5G2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb9E9Q5G2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Gm20760-201ENSMUST00000179197 648 ntBASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb9E9Q5G2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Trmt13-210ENSMUST00000198454 880 ntBASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb9E9Q5G2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb9E9Q5G2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb9E9Q5G2 Gm11249-201ENSMUST00000117071 859 ntBASIC21.65■■□□□ 1.06
Pcdhb9E9Q5G2 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.65■■□□□ 1.06
Pcdhb9E9Q5G2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb9E9Q5G2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Pcdhb9E9Q5G2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms