Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ift140E9PY46 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ift140E9PY46 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Ift140E9PY46 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ift140E9PY46 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ift140E9PY46 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
Ift140E9PY46 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC29.43■■■□□ 2.3
Ift140E9PY46 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC29.43■■■□□ 2.3
Ift140E9PY46 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Ift140E9PY46 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC29.43■■■□□ 2.3
Ift140E9PY46 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Ift140E9PY46 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ift140E9PY46 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC29.43■■■□□ 2.3
Ift140E9PY46 Gm8258-201ENSMUST00000055593 1449 ntBASIC29.43■■■□□ 2.3
Ift140E9PY46 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
Ift140E9PY46 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ift140E9PY46 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ift140E9PY46 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Ift140E9PY46 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ift140E9PY46 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ift140E9PY46 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Ift140E9PY46 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ift140E9PY46 Gm27704-201ENSMUST00000185094 107 ntBASIC29.42■■■□□ 2.3
Ift140E9PY46 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC29.42■■■□□ 2.3
Ift140E9PY46 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Ift140E9PY46 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
Ift140E9PY46 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
Ift140E9PY46 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Ift140E9PY46 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
Ift140E9PY46 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ift140E9PY46 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ift140E9PY46 Gm16061-201ENSMUST00000122167 857 ntBASIC29.41■■■□□ 2.3
Ift140E9PY46 Gm17807-201ENSMUST00000186869 298 ntBASIC29.41■■■□□ 2.3
Ift140E9PY46 AC133598.3-202ENSMUST00000224219 531 ntBASIC29.41■■■□□ 2.3
Ift140E9PY46 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Ift140E9PY46 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ift140E9PY46 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
Ift140E9PY46 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Ift140E9PY46 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ift140E9PY46 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC29.4■■■□□ 2.3
Ift140E9PY46 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ift140E9PY46 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC29.4■■■□□ 2.3
Ift140E9PY46 Gm18669-201ENSMUST00000216049 778 ntBASIC29.4■■■□□ 2.3
Ift140E9PY46 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ift140E9PY46 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ift140E9PY46 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ift140E9PY46 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ift140E9PY46 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC29.39■■■□□ 2.3
Ift140E9PY46 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC29.39■■■□□ 2.3
Ift140E9PY46 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ift140E9PY46 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ift140E9PY46 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC29.39■■■□□ 2.29
Ift140E9PY46 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Ift140E9PY46 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Ift140E9PY46 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ift140E9PY46 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ift140E9PY46 Gm4217-201ENSMUST00000182243 1002 ntBASIC29.38■■■□□ 2.29
Ift140E9PY46 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ift140E9PY46 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Ift140E9PY46 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Ift140E9PY46 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ift140E9PY46 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ift140E9PY46 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC29.37■■■□□ 2.29
Ift140E9PY46 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ift140E9PY46 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC29.37■■■□□ 2.29
Ift140E9PY46 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Ift140E9PY46 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC29.36■■■□□ 2.29
Ift140E9PY46 Gm5587-201ENSMUST00000206270 674 ntBASIC29.36■■■□□ 2.29
Ift140E9PY46 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Ift140E9PY46 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ift140E9PY46 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ift140E9PY46 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Ift140E9PY46 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Ift140E9PY46 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ift140E9PY46 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Ift140E9PY46 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC29.35■■■□□ 2.29
Ift140E9PY46 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ift140E9PY46 Gm44544-201ENSMUST00000207052 1844 ntBASIC29.34■■■□□ 2.29
Ift140E9PY46 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ift140E9PY46 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ift140E9PY46 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ift140E9PY46 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ift140E9PY46 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ift140E9PY46 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Ift140E9PY46 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC29.34■■■□□ 2.29
Ift140E9PY46 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ift140E9PY46 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ift140E9PY46 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ift140E9PY46 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ift140E9PY46 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ift140E9PY46 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms