Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc28a1E9PXX9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc28a1E9PXX9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Fst-202ENSMUST00000223640 2612 ntBASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a1E9PXX9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a1E9PXX9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Gm12922-201ENSMUST00000120626 809 ntBASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Slc28a1E9PXX9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Spcs1-204ENSMUST00000226782 949 ntBASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a1E9PXX9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc28a1E9PXX9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms