Protein–RNA interactions for Protein: E9PV98

Trim5, Tripartite motif-containing 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim5E9PV98 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim5E9PV98 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim5E9PV98 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim5E9PV98 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim5E9PV98 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim5E9PV98 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim5E9PV98 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim5E9PV98 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim5E9PV98 Gm7889-201ENSMUST00000185591 958 ntBASIC20.66■□□□□ 0.9
Trim5E9PV98 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim5E9PV98 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim5E9PV98 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim5E9PV98 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim5E9PV98 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim5E9PV98 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim5E9PV98 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim5E9PV98 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim5E9PV98 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim5E9PV98 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Trim5E9PV98 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Gm6659-201ENSMUST00000174752 547 ntBASIC20.65■□□□□ 0.9
Trim5E9PV98 Gm37292-201ENSMUST00000192062 758 ntBASIC20.65■□□□□ 0.9
Trim5E9PV98 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim5E9PV98 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim5E9PV98 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trim5E9PV98 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim5E9PV98 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim5E9PV98 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim5E9PV98 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.64■□□□□ 0.89
Trim5E9PV98 Gm3375-201ENSMUST00000203929 796 ntBASIC20.64■□□□□ 0.89
Trim5E9PV98 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trim5E9PV98 Timm23-208ENSMUST00000226683 750 ntBASIC20.64■□□□□ 0.89
Trim5E9PV98 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim5E9PV98 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trim5E9PV98 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim5E9PV98 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim5E9PV98 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim5E9PV98 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim5E9PV98 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim5E9PV98 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim5E9PV98 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim5E9PV98 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim5E9PV98 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim5E9PV98 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim5E9PV98 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim5E9PV98 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim5E9PV98 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim5E9PV98 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.63■□□□□ 0.89
Trim5E9PV98 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim5E9PV98 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim5E9PV98 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim5E9PV98 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.63■□□□□ 0.89
Trim5E9PV98 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim5E9PV98 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim5E9PV98 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim5E9PV98 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim5E9PV98 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim5E9PV98 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim5E9PV98 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim5E9PV98 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.62■□□□□ 0.89
Trim5E9PV98 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim5E9PV98 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.62■□□□□ 0.89
Trim5E9PV98 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim5E9PV98 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim5E9PV98 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Trim5E9PV98 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Trim5E9PV98 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.61■□□□□ 0.89
Trim5E9PV98 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.61■□□□□ 0.89
Trim5E9PV98 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim5E9PV98 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim5E9PV98 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim5E9PV98 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim5E9PV98 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim5E9PV98 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Trim5E9PV98 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.6■□□□□ 0.89
Trim5E9PV98 Gm38285-201ENSMUST00000192928 922 ntBASIC20.6■□□□□ 0.89
Trim5E9PV98 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim5E9PV98 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim5E9PV98 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim5E9PV98 Gm7367-201ENSMUST00000057611 492 ntBASIC20.6■□□□□ 0.89
Trim5E9PV98 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim5E9PV98 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim5E9PV98 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim5E9PV98 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms