Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Gm11860-201ENSMUST00000122346 1010 ntBASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 AC155729.1-201ENSMUST00000227758 544 ntBASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Gm11927-201ENSMUST00000118472 759 ntBASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Gm27389-201ENSMUST00000183622 195 ntBASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Gm8000-201ENSMUST00000188378 592 ntBASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Gm15794-201ENSMUST00000120182 631 ntBASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Hmcn1D3YXG0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Gm9013-201ENSMUST00000132939 882 ntBASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Gm32699-201ENSMUST00000221728 1988 ntBASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Gm6736-201ENSMUST00000166583 948 ntBASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Gm13474-201ENSMUST00000122466 815 ntBASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Hmcn1D3YXG0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 AC166341.7-201ENSMUST00000221698 126 ntBASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm42670-201ENSMUST00000201816 1292 ntBASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm19094-201ENSMUST00000209791 1246 ntBASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm3272-201ENSMUST00000181181 1229 ntBASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm10566-201ENSMUST00000086739 996 ntBASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm12085-201ENSMUST00000119263 940 ntBASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Gm10175-201ENSMUST00000086013 645 ntBASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms