Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp27D3YV89 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Gm12251-201ENSMUST00000117893 792 ntBASIC15.52■□□□□ 0.08
Mmp27D3YV89 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Mmp27D3YV89 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Mmp27D3YV89 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.52■□□□□ 0.07
Mmp27D3YV89 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.52■□□□□ 0.07
Mmp27D3YV89 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mmp27D3YV89 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mmp27D3YV89 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mmp27D3YV89 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mmp27D3YV89 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mmp27D3YV89 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Mmp27D3YV89 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.51■□□□□ 0.07
Mmp27D3YV89 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Mmp27D3YV89 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.51■□□□□ 0.07
Mmp27D3YV89 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Mmp27D3YV89 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Gm43173-201ENSMUST00000202246 593 ntBASIC15.5■□□□□ 0.07
Mmp27D3YV89 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Mmp27D3YV89 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.49■□□□□ 0.07
Mmp27D3YV89 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.49■□□□□ 0.07
Mmp27D3YV89 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Mmp27D3YV89 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms