Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col4a6B1AVK5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col4a6B1AVK5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col4a6B1AVK5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col4a6B1AVK5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Gm18032-201ENSMUST00000222541 538 ntBASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col4a6B1AVK5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a6B1AVK5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a6B1AVK5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a6B1AVK5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a6B1AVK5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.13■□□□□ 0.65
Col4a6B1AVK5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a6B1AVK5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a6B1AVK5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col4a6B1AVK5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Gm21362-201ENSMUST00000194272 928 ntBASIC19.12■□□□□ 0.65
Col4a6B1AVK5 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Col4a6B1AVK5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a6B1AVK5 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.1■□□□□ 0.65
Col4a6B1AVK5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a6B1AVK5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a6B1AVK5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a6B1AVK5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col4a6B1AVK5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a6B1AVK5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a6B1AVK5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.09■□□□□ 0.65
Col4a6B1AVK5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a6B1AVK5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.08■□□□□ 0.65
Col4a6B1AVK5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a6B1AVK5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a6B1AVK5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Col4a6B1AVK5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a6B1AVK5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Col4a6B1AVK5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a6B1AVK5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Col4a6B1AVK5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a6B1AVK5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a6B1AVK5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a6B1AVK5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms