Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col6a5A6H584 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col6a5A6H584 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col6a5A6H584 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Col6a5A6H584 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Col6a5A6H584 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col6a5A6H584 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col6a5A6H584 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.97□□□□□ -0.17
Col6a5A6H584 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.97□□□□□ -0.17
Col6a5A6H584 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a5A6H584 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.96□□□□□ -0.17
Col6a5A6H584 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a5A6H584 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a5A6H584 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a5A6H584 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.96□□□□□ -0.17
Col6a5A6H584 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.96□□□□□ -0.17
Col6a5A6H584 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a5A6H584 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a5A6H584 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a5A6H584 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col6a5A6H584 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.95□□□□□ -0.18
Col6a5A6H584 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC13.95□□□□□ -0.18
Col6a5A6H584 Gm21559-201ENSMUST00000220638 855 ntBASIC13.95□□□□□ -0.18
Col6a5A6H584 Zfp783-201ENSMUST00000095946 670 ntBASIC13.95□□□□□ -0.18
Col6a5A6H584 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a5A6H584 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a5A6H584 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a5A6H584 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.95□□□□□ -0.18
Col6a5A6H584 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.95□□□□□ -0.18
Col6a5A6H584 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a5A6H584 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a5A6H584 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a5A6H584 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col6a5A6H584 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col6a5A6H584 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Gm38285-201ENSMUST00000192928 922 ntBASIC13.94□□□□□ -0.18
Col6a5A6H584 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.94□□□□□ -0.18
Col6a5A6H584 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC13.94□□□□□ -0.18
Col6a5A6H584 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col6a5A6H584 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a5A6H584 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.94□□□□□ -0.18
Col6a5A6H584 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col6a5A6H584 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.94□□□□□ -0.18
Col6a5A6H584 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.94□□□□□ -0.18
Col6a5A6H584 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col6a5A6H584 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a5A6H584 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a5A6H584 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a5A6H584 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a5A6H584 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.93□□□□□ -0.18
Col6a5A6H584 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a5A6H584 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a5A6H584 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a5A6H584 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a5A6H584 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a5A6H584 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a5A6H584 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Col6a5A6H584 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Col6a5A6H584 Gm16061-201ENSMUST00000122167 857 ntBASIC13.92□□□□□ -0.18
Col6a5A6H584 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a5A6H584 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.92□□□□□ -0.18
Col6a5A6H584 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.92□□□□□ -0.18
Col6a5A6H584 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col6a5A6H584 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a5A6H584 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.92□□□□□ -0.18
Col6a5A6H584 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a5A6H584 Gm17808-201ENSMUST00000200859 894 ntBASIC13.92□□□□□ -0.18
Col6a5A6H584 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a5A6H584 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Col6a5A6H584 Gm20634-201ENSMUST00000090779 2956 ntBASIC13.92□□□□□ -0.18
Col6a5A6H584 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms