Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn1aA2APX8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.37■□□□□ 0.69
Scn1aA2APX8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn1aA2APX8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn1aA2APX8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn1aA2APX8 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.36■□□□□ 0.69
Scn1aA2APX8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.35■□□□□ 0.69
Scn1aA2APX8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Scn1aA2APX8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Scn1aA2APX8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn1aA2APX8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn1aA2APX8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.33■□□□□ 0.68
Scn1aA2APX8 Gm22240-201ENSMUST00000175225 82 ntBASIC19.33■□□□□ 0.68
Scn1aA2APX8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.33■□□□□ 0.68
Scn1aA2APX8 Mtag2-201ENSMUST00000058665 714 ntBASIC19.33■□□□□ 0.68
Scn1aA2APX8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn1aA2APX8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn1aA2APX8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn1aA2APX8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn1aA2APX8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn1aA2APX8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Scn1aA2APX8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn1aA2APX8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn1aA2APX8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn1aA2APX8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.32■□□□□ 0.68
Scn1aA2APX8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Gm8520-201ENSMUST00000186517 868 ntBASIC19.32■□□□□ 0.68
Scn1aA2APX8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Gm10698-201ENSMUST00000182663 604 ntBASIC19.32■□□□□ 0.68
Scn1aA2APX8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.32■□□□□ 0.68
Scn1aA2APX8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn1aA2APX8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Scn1aA2APX8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Scn1aA2APX8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Scn1aA2APX8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn1aA2APX8 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.31■□□□□ 0.68
Scn1aA2APX8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn1aA2APX8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn1aA2APX8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.31■□□□□ 0.68
Scn1aA2APX8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn1aA2APX8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scn1aA2APX8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms