Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.08■□□□□ 0.32
IsxA1A546 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.08■□□□□ 0.32
IsxA1A546 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
IsxA1A546 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
IsxA1A546 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.07■□□□□ 0.32
IsxA1A546 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.07■□□□□ 0.32
IsxA1A546 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
IsxA1A546 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IsxA1A546 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
IsxA1A546 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
IsxA1A546 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.06■□□□□ 0.32
IsxA1A546 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.06■□□□□ 0.32
IsxA1A546 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IsxA1A546 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.05■□□□□ 0.32
IsxA1A546 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
IsxA1A546 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.05■□□□□ 0.32
IsxA1A546 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
IsxA1A546 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.05■□□□□ 0.32
IsxA1A546 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.05■□□□□ 0.32
IsxA1A546 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.05■□□□□ 0.32
IsxA1A546 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IsxA1A546 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
IsxA1A546 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Gm9847-201ENSMUST00000052528 599 ntBASIC17.04■□□□□ 0.32
IsxA1A546 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IsxA1A546 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IsxA1A546 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IsxA1A546 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IsxA1A546 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
IsxA1A546 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IsxA1A546 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IsxA1A546 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.03■□□□□ 0.32
IsxA1A546 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
IsxA1A546 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
IsxA1A546 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IsxA1A546 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.03■□□□□ 0.32
IsxA1A546 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IsxA1A546 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IsxA1A546 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
IsxA1A546 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.02■□□□□ 0.32
IsxA1A546 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IsxA1A546 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
IsxA1A546 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IsxA1A546 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms