Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv1-88A0A140T8N1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv1-88A0A140T8N1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Igkv1-88A0A140T8N1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Igkv1-88A0A140T8N1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Igkv1-88A0A140T8N1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Igkv1-88A0A140T8N1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Grk6-206ENSMUST00000224995 2971 ntBASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.14□□□□□ -0.47
Igkv1-88A0A140T8N1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv1-88A0A140T8N1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.12□□□□□ -0.47
Igkv1-88A0A140T8N1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms