Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scn2aA0A0J9YTW6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn2aA0A0J9YTW6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn2aA0A0J9YTW6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Gm20049-201ENSMUST00000219950 730 ntBASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Dio3-201ENSMUST00000097228 1449 ntBASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Gm22325-201ENSMUST00000158904 308 ntBASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn2aA0A0J9YTW6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn2aA0A0J9YTW6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn2aA0A0J9YTW6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Gm37856-201ENSMUST00000191634 999 ntBASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn2aA0A0J9YTW6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2aA0A0J9YTW6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2aA0A0J9YTW6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn2aA0A0J9YTW6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms