Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.91□□□□□ -0.02
Trav13n-4A0A0G2JG01 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-4A0A0G2JG01 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Mir5133-201ENSMUST00000174955 77 ntBASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav13n-4A0A0G2JG01 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-4A0A0G2JG01 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13n-4A0A0G2JG01 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms