Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-4A0A0G2JFX3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-4A0A0G2JFX3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.65□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gm12251-201ENSMUST00000117893 792 ntBASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-4A0A0G2JFX3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms