Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv19A0A0B4J1H4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv19A0A0B4J1H4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.77□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.77□□□□□ -0.04
Trbv19A0A0B4J1H4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv19A0A0B4J1H4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Reep4-203ENSMUST00000226563 1444 ntBASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv19A0A0B4J1H4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv19A0A0B4J1H4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Gm13146-201ENSMUST00000118508 780 ntBASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.74□□□□□ -0.05
Trbv19A0A0B4J1H4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms