Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm9988-201ENSMUST00000069786 435 ntBASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ighv1-47A0A0A6YY41 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm38205-201ENSMUST00000192243 258 ntBASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-47A0A0A6YY41 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-47A0A0A6YY41 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.15■□□□□ 0.02
Ighv1-47A0A0A6YY41 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.14■□□□□ 0.01
Ighv1-47A0A0A6YY41 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-47A0A0A6YY41 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-47A0A0A6YY41 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms