Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gm8309-201ENSMUST00000206627 1448 ntBASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gm10602-201ENSMUST00000098239 609 ntBASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Golph3-205ENSMUST00000228671 2842 ntBASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-52A0A0A6YXC3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms