Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm6365-201ENSMUST00000054711 744 ntBASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm10602-201ENSMUST00000098239 609 ntBASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbc1A0A0A6YWV4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbc1A0A0A6YWV4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbc1A0A0A6YWV4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbc1A0A0A6YWV4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trbc1A0A0A6YWV4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Trbc1A0A0A6YWV4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms