Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm12922-201ENSMUST00000120626 809 ntBASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Spcs1-204ENSMUST00000226782 949 ntBASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gm43137-201ENSMUST00000198052 594 ntBASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-4-dv7A0A075B6C2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms