Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6n-6A0A075B6B2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6n-6A0A075B6B2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-6A0A075B6B2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6n-6A0A075B6B2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6n-6A0A075B6B2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms