Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-2A0A075B649 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-2A0A075B649 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-2A0A075B649 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-2A0A075B649 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-2A0A075B649 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms