Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Gm27011-201ENSMUST00000182352 972 ntBASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13-1A0A075B644 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Gm12441-201ENSMUST00000121806 588 ntBASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav13-1A0A075B644 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Gm13148-201ENSMUST00000118892 745 ntBASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-1A0A075B644 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-1A0A075B644 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-1A0A075B644 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-1A0A075B644 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-1A0A075B644 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13-1A0A075B644 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.02□□□□□ -0.32
Trav13-1A0A075B644 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms