Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cd40P27512 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.63■■□□□ 1.21
Cd40P27512 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.63■■□□□ 1.21
Cd40P27512 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cd40P27512 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cd40P27512 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cd40P27512 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cd40P27512 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cd40P27512 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cd40P27512 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.59■■□□□ 1.21
Cd40P27512 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cd40P27512 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cd40P27512 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cd40P27512 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.57■■□□□ 1.2
Cd40P27512 Gm9397-201ENSMUST00000200125 605 ntBASIC22.56■■□□□ 1.2
Cd40P27512 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Cd40P27512 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cd40P27512 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.55■■□□□ 1.2
Cd40P27512 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.55■■□□□ 1.2
Cd40P27512 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cd40P27512 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Cd40P27512 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
Cd40P27512 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cd40P27512 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cd40P27512 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cd40P27512 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cd40P27512 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.5■■□□□ 1.19
Cd40P27512 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd40P27512 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd40P27512 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.5■■□□□ 1.19
Cd40P27512 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.5■■□□□ 1.19
Cd40P27512 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.48■■□□□ 1.19
Cd40P27512 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cd40P27512 Gm45855-201ENSMUST00000212546 880 ntBASIC22.47■■□□□ 1.19
Cd40P27512 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.46■■□□□ 1.19
Cd40P27512 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cd40P27512 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cd40P27512 Gm24970-201ENSMUST00000175582 82 ntBASIC22.45■■□□□ 1.18
Cd40P27512 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.45■■□□□ 1.18
Cd40P27512 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd40P27512 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cd40P27512 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cd40P27512 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.43■■□□□ 1.18
Cd40P27512 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cd40P27512 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.42■■□□□ 1.18
Cd40P27512 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cd40P27512 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cd40P27512 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cd40P27512 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cd40P27512 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.41■■□□□ 1.18
Cd40P27512 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Cd40P27512 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.41■■□□□ 1.18
Cd40P27512 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cd40P27512 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Cd40P27512 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Cd40P27512 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.38■■□□□ 1.17
Cd40P27512 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.38■■□□□ 1.17
Cd40P27512 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cd40P27512 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.38■■□□□ 1.17
Cd40P27512 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cd40P27512 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cd40P27512 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.37■■□□□ 1.17
Cd40P27512 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Cd40P27512 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cd40P27512 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cd40P27512 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.35■■□□□ 1.17
Cd40P27512 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cd40P27512 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cd40P27512 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cd40P27512 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.34■■□□□ 1.17
Cd40P27512 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cd40P27512 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
Cd40P27512 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cd40P27512 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Cd40P27512 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cd40P27512 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd40P27512 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cd40P27512 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cd40P27512 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd40P27512 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cd40P27512 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Cd40P27512 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cd40P27512 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cd40P27512 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd40P27512 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd40P27512 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Cd40P27512 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cd40P27512 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cd40P27512 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cd40P27512 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd40P27512 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd40P27512 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.23■■□□□ 1.15
Cd40P27512 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd40P27512 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.23■■□□□ 1.15
Cd40P27512 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cd40P27512 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cd40P27512 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cd40P27512 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cd40P27512 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Cd40P27512 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms