Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PtcraP0C6B2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PtcraP0C6B2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PtcraP0C6B2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PtcraP0C6B2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.66■■□□□ 1.06
PtcraP0C6B2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PtcraP0C6B2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PtcraP0C6B2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PtcraP0C6B2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PtcraP0C6B2 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.65■■□□□ 1.06
PtcraP0C6B2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PtcraP0C6B2 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.64■■□□□ 1.05
PtcraP0C6B2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PtcraP0C6B2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PtcraP0C6B2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
PtcraP0C6B2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PtcraP0C6B2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.62■■□□□ 1.05
PtcraP0C6B2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.62■■□□□ 1.05
PtcraP0C6B2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PtcraP0C6B2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PtcraP0C6B2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PtcraP0C6B2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PtcraP0C6B2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PtcraP0C6B2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
PtcraP0C6B2 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.58■■□□□ 1.04
PtcraP0C6B2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PtcraP0C6B2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PtcraP0C6B2 Gm9397-201ENSMUST00000200125 605 ntBASIC21.55■■□□□ 1.04
PtcraP0C6B2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PtcraP0C6B2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.55■■□□□ 1.04
PtcraP0C6B2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PtcraP0C6B2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.53■■□□□ 1.04
PtcraP0C6B2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
PtcraP0C6B2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.53■■□□□ 1.04
PtcraP0C6B2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PtcraP0C6B2 Gm24970-201ENSMUST00000175582 82 ntBASIC21.49■■□□□ 1.03
PtcraP0C6B2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PtcraP0C6B2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.48■■□□□ 1.03
PtcraP0C6B2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.46■■□□□ 1.03
PtcraP0C6B2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PtcraP0C6B2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PtcraP0C6B2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.45■■□□□ 1.02
PtcraP0C6B2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PtcraP0C6B2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.44■■□□□ 1.02
PtcraP0C6B2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PtcraP0C6B2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.44■■□□□ 1.02
PtcraP0C6B2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PtcraP0C6B2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PtcraP0C6B2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PtcraP0C6B2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PtcraP0C6B2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PtcraP0C6B2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PtcraP0C6B2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.4■■□□□ 1.02
PtcraP0C6B2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
PtcraP0C6B2 Gm45855-201ENSMUST00000212546 880 ntBASIC21.39■■□□□ 1.01
PtcraP0C6B2 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.39■■□□□ 1.01
PtcraP0C6B2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PtcraP0C6B2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PtcraP0C6B2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PtcraP0C6B2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PtcraP0C6B2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.36■■□□□ 1.01
PtcraP0C6B2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PtcraP0C6B2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PtcraP0C6B2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PtcraP0C6B2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.34■■□□□ 1.01
PtcraP0C6B2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.34■■□□□ 1.01
PtcraP0C6B2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PtcraP0C6B2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PtcraP0C6B2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PtcraP0C6B2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PtcraP0C6B2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PtcraP0C6B2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PtcraP0C6B2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PtcraP0C6B2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PtcraP0C6B2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PtcraP0C6B2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PtcraP0C6B2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PtcraP0C6B2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PtcraP0C6B2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.28■■□□□ 1
PtcraP0C6B2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.28■■□□□ 1
PtcraP0C6B2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PtcraP0C6B2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.27■■□□□ 1
PtcraP0C6B2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.27■■□□□ 1
PtcraP0C6B2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PtcraP0C6B2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PtcraP0C6B2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PtcraP0C6B2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PtcraP0C6B2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms