Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PtcraP0C6B2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PtcraP0C6B2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PtcraP0C6B2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PtcraP0C6B2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.66■■□□□ 1.06
PtcraP0C6B2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PtcraP0C6B2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PtcraP0C6B2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PtcraP0C6B2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PtcraP0C6B2 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.65■■□□□ 1.06
PtcraP0C6B2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PtcraP0C6B2 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.64■■□□□ 1.05
PtcraP0C6B2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PtcraP0C6B2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PtcraP0C6B2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
PtcraP0C6B2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PtcraP0C6B2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.62■■□□□ 1.05
PtcraP0C6B2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.62■■□□□ 1.05
PtcraP0C6B2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PtcraP0C6B2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PtcraP0C6B2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PtcraP0C6B2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PtcraP0C6B2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PtcraP0C6B2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
PtcraP0C6B2 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.58■■□□□ 1.04
PtcraP0C6B2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PtcraP0C6B2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PtcraP0C6B2 Gm9397-201ENSMUST00000200125 605 ntBASIC21.55■■□□□ 1.04
PtcraP0C6B2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PtcraP0C6B2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.55■■□□□ 1.04
PtcraP0C6B2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PtcraP0C6B2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.53■■□□□ 1.04
PtcraP0C6B2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
PtcraP0C6B2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.53■■□□□ 1.04
PtcraP0C6B2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PtcraP0C6B2 Gm24970-201ENSMUST00000175582 82 ntBASIC21.49■■□□□ 1.03
PtcraP0C6B2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PtcraP0C6B2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.48■■□□□ 1.03
PtcraP0C6B2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PtcraP0C6B2 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.46■■□□□ 1.03
PtcraP0C6B2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PtcraP0C6B2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PtcraP0C6B2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.45■■□□□ 1.02
PtcraP0C6B2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PtcraP0C6B2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.44■■□□□ 1.02
PtcraP0C6B2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PtcraP0C6B2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.44■■□□□ 1.02
PtcraP0C6B2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PtcraP0C6B2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PtcraP0C6B2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PtcraP0C6B2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PtcraP0C6B2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PtcraP0C6B2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PtcraP0C6B2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PtcraP0C6B2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.4■■□□□ 1.02
PtcraP0C6B2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
PtcraP0C6B2 Gm45855-201ENSMUST00000212546 880 ntBASIC21.39■■□□□ 1.01
PtcraP0C6B2 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.39■■□□□ 1.01
PtcraP0C6B2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PtcraP0C6B2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PtcraP0C6B2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PtcraP0C6B2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PtcraP0C6B2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.36■■□□□ 1.01
PtcraP0C6B2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PtcraP0C6B2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PtcraP0C6B2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PtcraP0C6B2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.34■■□□□ 1.01
PtcraP0C6B2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.34■■□□□ 1.01
PtcraP0C6B2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PtcraP0C6B2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PtcraP0C6B2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PtcraP0C6B2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PtcraP0C6B2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PtcraP0C6B2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PtcraP0C6B2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PtcraP0C6B2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PtcraP0C6B2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PtcraP0C6B2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PtcraP0C6B2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PtcraP0C6B2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PtcraP0C6B2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.28■■□□□ 1
PtcraP0C6B2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.28■■□□□ 1
PtcraP0C6B2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PtcraP0C6B2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.27■■□□□ 1
PtcraP0C6B2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.27■■□□□ 1
PtcraP0C6B2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PtcraP0C6B2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PtcraP0C6B2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PtcraP0C6B2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PtcraP0C6B2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms