Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm15054-201ENSMUST00000117393 281 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm14248-201ENSMUST00000117790 544 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm16056-201ENSMUST00000119293 135 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm12593-201ENSMUST00000120981 743 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm20702-201ENSMUST00000176181 460 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm28142-201ENSMUST00000186899 698 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm44356-201ENSMUST00000196731 111 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm43040-201ENSMUST00000202399 558 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm44979-201ENSMUST00000206218 287 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm45506-201ENSMUST00000211620 280 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim3Q9R1R2 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm22470-201ENSMUST00000104117 130 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm25276-201ENSMUST00000104300 124 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm24893-201ENSMUST00000122745 369 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm7418-201ENSMUST00000162120 801 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm4308-201ENSMUST00000179735 914 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm29008-201ENSMUST00000189387 298 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm37225-201ENSMUST00000193423 325 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm5723-201ENSMUST00000203096 432 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm18503-201ENSMUST00000220340 728 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms