Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm17965-201ENSMUST00000193904 517 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm34583-203ENSMUST00000202586 454 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm6681-201ENSMUST00000205215 607 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm45042-201ENSMUST00000207377 211 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm45432-201ENSMUST00000210391 416 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC6.73□□□□□ -1.33
Cdc40Q9DC48 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm25396-201ENSMUST00000103981 133 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm25631-201ENSMUST00000104390 130 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm11371-201ENSMUST00000120294 385 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm14380-201ENSMUST00000122298 431 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm25281-201ENSMUST00000157270 104 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm8046-201ENSMUST00000172151 616 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm5147-201ENSMUST00000185999 794 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm28428-201ENSMUST00000188886 697 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm44192-201ENSMUST00000204195 556 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm8058-201ENSMUST00000217247 587 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm25189-201ENSMUST00000083911 164 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Cdc40Q9DC48 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Cdc40Q9DC48 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Cdc40Q9DC48 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Cdc40Q9DC48 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.71□□□□□ -1.33
Cdc40Q9DC48 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Cdc40Q9DC48 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cdc40Q9DC48 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms