Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Smc1aQ9CU62 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm25757-201ENSMUST00000103986 123 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm24869-201ENSMUST00000104072 128 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm19840-201ENSMUST00000169624 882 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm20452-201ENSMUST00000174686 513 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm23945-201ENSMUST00000179609 92 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm18352-201ENSMUST00000189113 902 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm37883-201ENSMUST00000194970 725 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm44590-201ENSMUST00000206161 391 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm45198-201ENSMUST00000206796 591 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm45042-201ENSMUST00000207377 211 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm25189-201ENSMUST00000083911 164 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Smc1aQ9CU62 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.09□□□□□ -1.12
Smc1aQ9CU62 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm22231-201ENSMUST00000101027 73 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm11810-201ENSMUST00000118311 333 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm13724-201ENSMUST00000122395 1155 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm16297-201ENSMUST00000161466 459 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm17149-201ENSMUST00000164712 375 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm29562-201ENSMUST00000190113 904 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm21054-201ENSMUST00000203981 380 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm44044-201ENSMUST00000205178 1089 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 158.1 ms