Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm37706-201ENSMUST00000195379 2765 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm13013-201ENSMUST00000119087 523 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Mir3078-201ENSMUST00000175231 87 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm25690-201ENSMUST00000175439 77 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm37150-201ENSMUST00000193900 2754 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Lipe-203ENSMUST00000105177 1251 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm22261-201ENSMUST00000158691 324 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm4742-201ENSMUST00000200261 771 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm22865-201ENSMUST00000083949 214 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cdh23Q99PF4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm26422-201ENSMUST00000104276 132 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm22724-201ENSMUST00000158091 127 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm25603-201ENSMUST00000158361 105 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm25675-201ENSMUST00000174979 118 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm43054-201ENSMUST00000199495 884 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm35108-201ENSMUST00000194321 699 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm33191-201ENSMUST00000195604 699 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm22599-201ENSMUST00000157597 132 ntBASIC6.97□□□□□ -1.29
Cdh23Q99PF4 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms