Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm24869-201ENSMUST00000104072 128 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm23323-201ENSMUST00000104471 133 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 n-R5s172-201ENSMUST00000104508 114 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm14932-201ENSMUST00000117112 453 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm12392-201ENSMUST00000118014 938 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm12090-201ENSMUST00000118692 758 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm11991-201ENSMUST00000119652 1074 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm11726-201ENSMUST00000121028 424 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm24893-201ENSMUST00000122745 369 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm25653-201ENSMUST00000158473 138 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm18382-201ENSMUST00000194394 582 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm6522-201ENSMUST00000197160 1203 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm5305-201ENSMUST00000204010 746 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm44245-201ENSMUST00000204304 232 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm44931-201ENSMUST00000206056 545 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 CT573422.1-201ENSMUST00000216655 405 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm18972-201ENSMUST00000218873 630 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm19134-201ENSMUST00000221203 487 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 AC116395.1-201ENSMUST00000225480 1143 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Anxa13-202ENSMUST00000227274 1201 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm6863-201ENSMUST00000052882 636 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm44667-201ENSMUST00000207632 3337 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 AC121860.1-201ENSMUST00000227908 2787 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Mir669l-201ENSMUST00000103771 98 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm13680-201ENSMUST00000119790 793 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm16053-201ENSMUST00000120511 188 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm13808-201ENSMUST00000121353 184 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm15362-201ENSMUST00000121459 388 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm18848-201ENSMUST00000182069 792 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm21181-201ENSMUST00000186249 330 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm28164-201ENSMUST00000190143 442 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm7299-201ENSMUST00000194441 581 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Gm42619-201ENSMUST00000197564 1136 ntBASIC8.32□□□□□ -1.08
Clp1Q99LI9 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms