Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clrn1Q8K445 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
Clrn1Q8K445 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Clrn1Q8K445 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clrn1Q8K445 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Clrn1Q8K445 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.02□□□□□ -1.29
Clrn1Q8K445 Gm28359-201ENSMUST00000187470 1322 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm37426-201ENSMUST00000195241 2470 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm11855-201ENSMUST00000121562 1869 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm14891-201ENSMUST00000117378 596 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm11483-201ENSMUST00000119839 247 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm11688-201ENSMUST00000122145 308 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm17164-201ENSMUST00000169013 506 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm7393-201ENSMUST00000172650 739 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm29008-201ENSMUST00000189387 298 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm42452-201ENSMUST00000199749 617 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm7392-201ENSMUST00000217815 345 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 AC154851.2-201ENSMUST00000222172 644 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 AC168059.2-201ENSMUST00000224473 333 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.01□□□□□ -1.29
Clrn1Q8K445 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Clrn1Q8K445 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm38099-201ENSMUST00000193280 3170 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm43331-201ENSMUST00000197991 1689 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm26254-201ENSMUST00000122491 118 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Trav8-2-201ENSMUST00000130122 337 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms