Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm37254-201ENSMUST00000193542 3901 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Ccdc38Q8CDN8 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm3608-201ENSMUST00000086725 2858 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 AU020206-202ENSMUST00000206358 3009 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm23529-201ENSMUST00000104562 132 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm2735-201ENSMUST00000136133 277 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm43725-201ENSMUST00000200122 369 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm44566-201ENSMUST00000207638 304 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm45478-201ENSMUST00000209472 211 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm9289-201ENSMUST00000221269 606 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm24924-201ENSMUST00000084007 164 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc38Q8CDN8 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm25276-201ENSMUST00000104300 124 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm15048-201ENSMUST00000118201 954 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm15644-201ENSMUST00000121764 387 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm24139-201ENSMUST00000122780 288 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Mir6409-201ENSMUST00000184957 92 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm6123-201ENSMUST00000193658 1069 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm7493-201ENSMUST00000085919 626 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms