Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm26016-201ENSMUST00000104403 129 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm14904-201ENSMUST00000117067 335 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm13525-201ENSMUST00000120607 478 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm12593-201ENSMUST00000120981 743 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Mir6921-201ENSMUST00000183719 80 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Mir6403-201ENSMUST00000185007 129 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm5305-201ENSMUST00000204010 746 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 AC133598.3-204ENSMUST00000224260 767 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Vps53Q8CCB4 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.46□□□□□ -1.05
Vps53Q8CCB4 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Gm42478-201ENSMUST00000199252 1467 ntBASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Vps53Q8CCB4 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm25344-201ENSMUST00000104503 132 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm11810-201ENSMUST00000118311 333 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm24011-201ENSMUST00000157732 268 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm22132-201ENSMUST00000175316 100 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm45432-201ENSMUST00000210391 416 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Vps53Q8CCB4 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Vps53Q8CCB4 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.45□□□□□ -1.06
Vps53Q8CCB4 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms