Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm13744-201ENSMUST00000118953 850 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm22025-201ENSMUST00000122734 302 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm23018-201ENSMUST00000177928 109 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm46231-201ENSMUST00000220152 314 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm26130-201ENSMUST00000083171 138 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm25189-201ENSMUST00000083911 164 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Atg4aQ8C9S8 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm11903-201ENSMUST00000118958 727 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm22342-201ENSMUST00000122647 298 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm18875-201ENSMUST00000188563 882 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm9240-201ENSMUST00000206527 742 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm8804-201ENSMUST00000212292 798 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm45739-201ENSMUST00000213094 388 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm23734-201ENSMUST00000083753 109 ntBASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Atg4aQ8C9S8 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Mir760-201ENSMUST00000103257 119 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm22781-201ENSMUST00000104083 137 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm11434-201ENSMUST00000122379 629 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms