Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trub1Q8C0D0 Gm43221-201ENSMUST00000197612 2071 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm26480-201ENSMUST00000122619 297 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm28006-201ENSMUST00000183841 122 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Mir378d-201ENSMUST00000184232 110 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm5261-201ENSMUST00000185860 713 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm6472-202ENSMUST00000187973 582 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm10416-201ENSMUST00000197379 645 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm9240-201ENSMUST00000206527 742 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm17611-202ENSMUST00000220613 814 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Snora21-201ENSMUST00000082967 137 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trub1Q8C0D0 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm37669-201ENSMUST00000192184 820 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm42580-201ENSMUST00000197223 753 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm4605-201ENSMUST00000203148 625 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Gm19011-201ENSMUST00000221777 808 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.31□□□□□ -1.24
Trub1Q8C0D0 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms