Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 AC107763.1-202ENSMUST00000225021 2663 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm42668-201ENSMUST00000200747 2487 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm25877-201ENSMUST00000104326 129 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm14579-201ENSMUST00000117068 283 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm24380-201ENSMUST00000122696 324 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm22024-201ENSMUST00000122733 287 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm16102-201ENSMUST00000160955 420 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm24756-201ENSMUST00000177002 96 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm37533-201ENSMUST00000193848 545 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm20128-201ENSMUST00000196189 417 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm4860-201ENSMUST00000200368 454 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm9357-201ENSMUST00000207138 805 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm44943-201ENSMUST00000207254 300 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 CT009713.1-201ENSMUST00000224828 853 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm2840-201ENSMUST00000048361 411 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm24451-201ENSMUST00000083353 133 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm37706-201ENSMUST00000195379 2765 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Usp40Q8BWR4 AC154482.1-201ENSMUST00000223248 2483 ntBASIC9.87□□□□□ -0.83
Usp40Q8BWR4 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm22256-201ENSMUST00000102291 107 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm14863-201ENSMUST00000119648 307 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm15109-201ENSMUST00000133085 2026 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm24545-201ENSMUST00000158651 85 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm7289-201ENSMUST00000168993 734 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm4373-201ENSMUST00000178571 556 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 AC069561.1-201ENSMUST00000213750 424 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 AC153847.1-201ENSMUST00000214524 353 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm8058-201ENSMUST00000217247 587 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 AC124184.1-201ENSMUST00000218167 283 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm43534-201ENSMUST00000197685 2853 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm7690-201ENSMUST00000190885 1399 ntBASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp40Q8BWR4 Gm8844-201ENSMUST00000119460 2614 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms