Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
Nup98Q6PFD9 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.34□□□□□ -1.08
Nup98Q6PFD9 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm43867-201ENSMUST00000203860 525 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm44163-201ENSMUST00000205140 475 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm9110-201ENSMUST00000219035 617 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm7441-201ENSMUST00000220697 1074 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm12939-201ENSMUST00000117303 165 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm12135-201ENSMUST00000119170 466 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm23740-201ENSMUST00000157385 100 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm4202-201ENSMUST00000169025 733 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm43725-201ENSMUST00000200122 369 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm7252-201ENSMUST00000223284 456 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm10773-201ENSMUST00000218071 3935 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nup98Q6PFD9 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Xpo7-206ENSMUST00000228346 4491 ntBASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm44538-201ENSMUST00000205615 348 ntBASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm6575-201ENSMUST00000222946 697 ntBASIC8.32□□□□□ -1.08
Nup98Q6PFD9 AC163667.1-201ENSMUST00000225201 1289 ntBASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms