Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Tpm1P58771 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Tpm1P58771 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Tpm1P58771 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.89□□□□□ -1.15
Tpm1P58771 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Tpm1P58771 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.88□□□□□ -1.15
Tpm1P58771 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm22150-201ENSMUST00000104447 135 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm41-201ENSMUST00000116183 1023 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm26469-201ENSMUST00000116765 121 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm13858-201ENSMUST00000118862 671 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm15481-201ENSMUST00000120264 539 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm7426-201ENSMUST00000179046 404 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
Tpm1P58771 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm36935-201ENSMUST00000192526 292 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Pisrt1-201ENSMUST00000195532 515 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm9710-201ENSMUST00000198053 499 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm44451-201ENSMUST00000203767 483 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.88□□□□□ -1.15
Tpm1P58771 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC7.88□□□□□ -1.15
Tpm1P58771 AC161537.1-202ENSMUST00000228450 868 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Tpm1P58771 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm24924-201ENSMUST00000084007 164 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Tpm1P58771 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.88□□□□□ -1.15
Tpm1P58771 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Tpm1P58771 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
Tpm1P58771 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.87□□□□□ -1.15
Tpm1P58771 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.87□□□□□ -1.15
Tpm1P58771 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.87□□□□□ -1.15
Tpm1P58771 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Tpm1P58771 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.87□□□□□ -1.15
Tpm1P58771 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC7.87□□□□□ -1.15
Tpm1P58771 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Tpm1P58771 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.87□□□□□ -1.15
Tpm1P58771 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC7.87□□□□□ -1.15
Tpm1P58771 AC162940.1-201ENSMUST00000224745 1167 ntBASIC7.87□□□□□ -1.15
Tpm1P58771 AV026068-225ENSMUST00000225042 490 ntBASIC7.87□□□□□ -1.15
Tpm1P58771 Gm2840-201ENSMUST00000048361 411 ntBASIC7.87□□□□□ -1.15
Tpm1P58771 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Tpm1P58771 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Tpm1P58771 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Tpm1P58771 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.87□□□□□ -1.15
Tpm1P58771 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.87□□□□□ -1.15
Tpm1P58771 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Tpm1P58771 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Tpm1P58771 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Tpm1P58771 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Tpm1P58771 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Tpm1P58771 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Tpm1P58771 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Tpm1P58771 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Tpm1P58771 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Tpm1P58771 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Tpm1P58771 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.86□□□□□ -1.15
Tpm1P58771 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Tpm1P58771 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.86□□□□□ -1.15
Tpm1P58771 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.86□□□□□ -1.15
Tpm1P58771 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms