Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Msh6P54276 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 Gm26575-201ENSMUST00000181714 2232 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Msh6P54276 Gm22774-201ENSMUST00000102084 109 ntBASIC9.13□□□□□ -0.95
Msh6P54276 n-R5s72-201ENSMUST00000104518 119 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Gm16073-201ENSMUST00000116032 517 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Gm13352-201ENSMUST00000117515 262 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC9.13□□□□□ -0.95
Msh6P54276 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Msh6P54276 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Mir5617-201ENSMUST00000176786 57 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Gm27018-201ENSMUST00000181136 225 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC9.13□□□□□ -0.95
Msh6P54276 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC9.13□□□□□ -0.95
Msh6P54276 AC117240.1-201ENSMUST00000199436 61 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Gm45279-201ENSMUST00000210315 391 ntBASIC9.13□□□□□ -0.95
Msh6P54276 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Msh6P54276 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Msh6P54276 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Msh6P54276 Gm44021-201ENSMUST00000203055 3516 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Msh6P54276 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Msh6P54276 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC9.13□□□□□ -0.95
Msh6P54276 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 AC158986.1-201ENSMUST00000228391 3455 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Gm6786-201ENSMUST00000203165 1915 ntBASIC9.13□□□□□ -0.95
Msh6P54276 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Msh6P54276 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Msh6P54276 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm14116-201ENSMUST00000117733 805 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm12451-201ENSMUST00000121636 633 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm13669-201ENSMUST00000122366 457 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm25395-201ENSMUST00000157343 272 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm9359-201ENSMUST00000163721 1221 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm26528-201ENSMUST00000181965 283 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm8183-201ENSMUST00000183134 980 ntBASIC9.12□□□□□ -0.95
Msh6P54276 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm7867-201ENSMUST00000189856 546 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Gm37322-201ENSMUST00000193409 337 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC9.12□□□□□ -0.95
Msh6P54276 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 AC151730.1-201ENSMUST00000226106 448 ntBASIC9.12□□□□□ -0.95
Msh6P54276 AC154324.1-201ENSMUST00000226711 814 ntBASIC9.12□□□□□ -0.95
Msh6P54276 AC154380.1-201ENSMUST00000226804 720 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm37161-201ENSMUST00000191994 2697 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC9.12□□□□□ -0.95
Msh6P54276 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Gm26645-201ENSMUST00000181076 1316 ntBASIC9.12□□□□□ -0.95
Msh6P54276 AC132465.1-201ENSMUST00000219938 1307 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Gm6679-201ENSMUST00000191467 1869 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm42972-201ENSMUST00000196937 5617 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms