Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22604-201ENSMUST00000157604 311 ntBASIC8.43□□□□□ -1.06
Traf1P39428 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.43□□□□□ -1.06
Traf1P39428 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.43□□□□□ -1.06
Traf1P39428 Gm28416-201ENSMUST00000188334 292 ntBASIC8.43□□□□□ -1.06
Traf1P39428 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.43□□□□□ -1.06
Traf1P39428 Gm6681-201ENSMUST00000205215 607 ntBASIC8.43□□□□□ -1.06
Traf1P39428 Gm45497-201ENSMUST00000211701 740 ntBASIC8.43□□□□□ -1.06
Traf1P39428 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.43□□□□□ -1.06
Traf1P39428 CT009711.2-202ENSMUST00000224538 973 ntBASIC8.43□□□□□ -1.06
Traf1P39428 AV026068-229ENSMUST00000225516 595 ntBASIC8.43□□□□□ -1.06
Traf1P39428 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.43□□□□□ -1.06
Traf1P39428 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Traf1P39428 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Traf1P39428 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.43□□□□□ -1.06
Traf1P39428 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Traf1P39428 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Traf1P39428 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Gm15739-201ENSMUST00000118049 872 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Gm13444-201ENSMUST00000119445 522 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Gm13735-201ENSMUST00000120217 670 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Gm14787-201ENSMUST00000121236 388 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Gm13282-201ENSMUST00000121577 545 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Gm11434-201ENSMUST00000122379 629 ntBASIC8.42□□□□□ -1.06
Traf1P39428 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.42□□□□□ -1.06
Traf1P39428 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.42□□□□□ -1.06
Traf1P39428 Gm3208-201ENSMUST00000168281 427 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Gm28070-201ENSMUST00000191502 445 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.42□□□□□ -1.06
Traf1P39428 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.42□□□□□ -1.06
Traf1P39428 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.42□□□□□ -1.06
Traf1P39428 AC124450.1-201ENSMUST00000225569 495 ntBASIC8.42□□□□□ -1.06
Traf1P39428 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Traf1P39428 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.42□□□□□ -1.06
Traf1P39428 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.42□□□□□ -1.06
Traf1P39428 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.42□□□□□ -1.06
Traf1P39428 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.42□□□□□ -1.06
Traf1P39428 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Traf1P39428 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.42□□□□□ -1.06
Traf1P39428 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Traf1P39428 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.42□□□□□ -1.06
Traf1P39428 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Traf1P39428 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Traf1P39428 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Traf1P39428 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.41□□□□□ -1.06
Traf1P39428 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.41□□□□□ -1.06
Traf1P39428 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Traf1P39428 Gm12104-201ENSMUST00000120359 979 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Gm11882-201ENSMUST00000121463 506 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.41□□□□□ -1.06
Traf1P39428 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Mir6357-201ENSMUST00000184246 104 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Gm7412-201ENSMUST00000191692 605 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Gm21048-201ENSMUST00000202470 1166 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Gm44971-201ENSMUST00000206192 337 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Gm44566-201ENSMUST00000207638 304 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.41□□□□□ -1.06
Traf1P39428 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Traf1P39428 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Traf1P39428 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Traf1P39428 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Traf1P39428 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.41□□□□□ -1.06
Traf1P39428 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Traf1P39428 Grik1-209ENSMUST00000227986 2942 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms