Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm38022-201ENSMUST00000191762 403 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sdc1P18828 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm19739-201ENSMUST00000195941 153 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm4870-201ENSMUST00000198525 1251 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm43008-201ENSMUST00000202346 286 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.73□□□□□ -1.49
Sdc1P18828 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm35412-201ENSMUST00000220437 999 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 AC125223.1-201ENSMUST00000224004 749 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sdc1P18828 n-R5s74-201ENSMUST00000082654 116 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sdc1P18828 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC5.73□□□□□ -1.49
Sdc1P18828 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sdc1P18828 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm18726-201ENSMUST00000218175 2010 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sdc1P18828 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC5.72□□□□□ -1.49
Sdc1P18828 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm26012-201ENSMUST00000104411 128 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm13545-201ENSMUST00000119044 482 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Fau-ps2-201ENSMUST00000119333 371 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm25193-201ENSMUST00000176615 97 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Sdc1P18828 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.72□□□□□ -1.49
Sdc1P18828 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm7442-201ENSMUST00000197778 383 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm45497-201ENSMUST00000211701 740 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm18860-201ENSMUST00000212029 764 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm2981-201ENSMUST00000213947 694 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 AL590616.1-201ENSMUST00000223339 574 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sdc1P18828 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm23037-201ENSMUST00000083874 324 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm37067-201ENSMUST00000195730 1628 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sdc1P18828 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sdc1P18828 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.72□□□□□ -1.49
Sdc1P18828 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sdc1P18828 AC154522.1-201ENSMUST00000224647 1903 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sdc1P18828 AC125074.1-201ENSMUST00000227970 1331 ntBASIC5.72□□□□□ -1.49
Sdc1P18828 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sdc1P18828 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Sdc1P18828 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Sdc1P18828 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC5.71□□□□□ -1.49
Sdc1P18828 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sdc1P18828 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sdc1P18828 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms