Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.07
Col1a1P11087 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Col1a1P11087 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col1a1P11087 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.4□□□□□ -1.07
Col1a1P11087 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col1a1P11087 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Col1a1P11087 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.39□□□□□ -1.07
Col1a1P11087 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.39□□□□□ -1.07
Col1a1P11087 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm9506-201ENSMUST00000118516 320 ntBASIC8.39□□□□□ -1.07
Col1a1P11087 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.39□□□□□ -1.07
Col1a1P11087 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm28958-201ENSMUST00000185864 703 ntBASIC8.39□□□□□ -1.07
Col1a1P11087 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.39□□□□□ -1.07
Col1a1P11087 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm22351-201ENSMUST00000083925 107 ntBASIC8.39□□□□□ -1.07
Col1a1P11087 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Col1a1P11087 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.39□□□□□ -1.07
Col1a1P11087 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.39□□□□□ -1.07
Col1a1P11087 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col1a1P11087 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col1a1P11087 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col1a1P11087 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.39□□□□□ -1.07
Col1a1P11087 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.39□□□□□ -1.07
Col1a1P11087 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col1a1P11087 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC8.39□□□□□ -1.07
Col1a1P11087 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm5406-201ENSMUST00000120054 766 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm12402-201ENSMUST00000120536 334 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm12101-201ENSMUST00000121590 390 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm22024-201ENSMUST00000122733 287 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm16276-201ENSMUST00000131218 262 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm5345-201ENSMUST00000183076 1014 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Mir7072-201ENSMUST00000184542 60 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC8.38□□□□□ -1.07
Col1a1P11087 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Col1a1P11087 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm38574-201ENSMUST00000211855 640 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm3678-201ENSMUST00000218888 492 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Mir425-201ENSMUST00000083645 85 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Col1a1P11087 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Col1a1P11087 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.38□□□□□ -1.07
Col1a1P11087 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Col1a1P11087 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col1a1P11087 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.38□□□□□ -1.07
Col1a1P11087 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Col1a1P11087 Gm7658-201ENSMUST00000119064 1124 ntBASIC8.38□□□□□ -1.07
Col1a1P11087 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms