Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm23639-201ENSMUST00000175078 132 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm26179-201ENSMUST00000177723 132 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm6472-202ENSMUST00000187973 582 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 AC147245.1-201ENSMUST00000223294 677 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 AC140451.1-201ENSMUST00000227984 737 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm22504-201ENSMUST00000082963 139 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm10247-201ENSMUST00000090395 333 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Chmp6P0C0A3 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm25546-201ENSMUST00000103977 132 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm13313-201ENSMUST00000118938 1084 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm12601-201ENSMUST00000118994 846 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm15186-201ENSMUST00000119345 563 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm13525-201ENSMUST00000120607 478 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm7418-201ENSMUST00000162120 801 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Mir8114-201ENSMUST00000183582 111 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm27401-201ENSMUST00000184052 173 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm36928-201ENSMUST00000192466 694 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Ighv1-17-201ENSMUST00000194435 350 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm37325-201ENSMUST00000194971 694 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm19175-201ENSMUST00000199895 916 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm42734-201ENSMUST00000201656 878 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm8921-201ENSMUST00000204306 649 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.79□□□□□ -1.16
Chmp6P0C0A3 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Chmp6P0C0A3 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm8916-201ENSMUST00000119732 949 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm2735-201ENSMUST00000136133 277 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm27026-201ENSMUST00000183003 892 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm28114-201ENSMUST00000187232 379 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm17965-201ENSMUST00000193904 517 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms