Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Hoxc9P09633 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Hoxc9P09633 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm6866-201ENSMUST00000188559 2549 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm18248-201ENSMUST00000191164 1846 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm14747-201ENSMUST00000149888 984 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm24781-201ENSMUST00000157636 117 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm9285-201ENSMUST00000177691 697 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm27018-201ENSMUST00000181136 225 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Zfp572-202ENSMUST00000184208 1078 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm37439-201ENSMUST00000193150 856 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm37322-201ENSMUST00000193409 337 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 AC122844.1-201ENSMUST00000195971 107 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC9.27□□□□□ -0.93
Hoxc9P09633 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC9.27□□□□□ -0.93
Hoxc9P09633 AC091237.1-201ENSMUST00000224911 637 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 AC122533.1-201ENSMUST00000225177 767 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 AC164436.1-201ENSMUST00000227074 772 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 CT025619.3-201ENSMUST00000216299 3267 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm43339-201ENSMUST00000200032 1606 ntBASIC9.27□□□□□ -0.93
Hoxc9P09633 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Hoxc9P09633 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hoxc9P09633 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 AC117608.1-201ENSMUST00000225500 3418 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 AC124680.1-201ENSMUST00000223923 1585 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm11472-201ENSMUST00000121305 556 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm12920-201ENSMUST00000121818 1186 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm24176-201ENSMUST00000158928 121 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm29663-201ENSMUST00000186962 853 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm36965-201ENSMUST00000193797 394 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm43033-201ENSMUST00000199682 425 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm8058-201ENSMUST00000217247 587 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 AC165349.1-201ENSMUST00000217896 424 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 AC164295.1-201ENSMUST00000224861 186 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 CT009711.2-201ENSMUST00000225352 934 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm45182-201ENSMUST00000207579 2404 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Gm37109-201ENSMUST00000195475 2254 ntBASIC9.26□□□□□ -0.93
Hoxc9P09633 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxc9P09633 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Hoxc9P09633 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms