Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm23192-201ENSMUST00000102434 96 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm24071-201ENSMUST00000104520 132 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm13458-201ENSMUST00000118239 367 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm11945-201ENSMUST00000120551 476 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm15158-201ENSMUST00000120577 570 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm15220-201ENSMUST00000120730 379 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm25320-201ENSMUST00000122551 324 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC5.78□□□□□ -1.48
Hmgb3O54879 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm24530-201ENSMUST00000157948 288 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Traj54-201ENSMUST00000165071 54 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm4781-201ENSMUST00000167995 781 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm6838-201ENSMUST00000172851 582 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm20694-201ENSMUST00000176943 404 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm29273-201ENSMUST00000188880 262 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm9723-201ENSMUST00000192100 457 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm43815-201ENSMUST00000197676 990 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm42489-201ENSMUST00000198964 669 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC5.78□□□□□ -1.48
Hmgb3O54879 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Cthrc1-204ENSMUST00000226433 596 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 AC121997.2-202ENSMUST00000227158 939 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Hmgb3O54879 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Gm44769-201ENSMUST00000206120 2809 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.78□□□□□ -1.48
Hmgb3O54879 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hmgb3O54879 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm11282-201ENSMUST00000119018 1416 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm22934-201ENSMUST00000103961 132 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm11901-201ENSMUST00000120412 437 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm26351-201ENSMUST00000157532 232 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm23276-201ENSMUST00000157913 138 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm26407-201ENSMUST00000158504 307 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm5445-201ENSMUST00000180224 480 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm43310-201ENSMUST00000198975 820 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Hmgb3O54879 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm18562-201ENSMUST00000209949 915 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gm9689-201ENSMUST00000210009 428 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 AC119987.1-201ENSMUST00000212316 848 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC5.77□□□□□ -1.49
Hmgb3O54879 AC110176.1-201ENSMUST00000226219 504 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 Gnpnat1-202ENSMUST00000226276 710 ntBASIC5.77□□□□□ -1.49
Hmgb3O54879 AC156574.1-201ENSMUST00000227084 452 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms