Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm13821-201ENSMUST00000202029 3201 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm37785-201ENSMUST00000195783 2408 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm6987-201ENSMUST00000119319 428 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm25722-201ENSMUST00000157498 279 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm24756-201ENSMUST00000177002 96 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm9167-201ENSMUST00000182469 962 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Scn3aA2ASI5 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm11434-201ENSMUST00000122379 629 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm12504-202ENSMUST00000148026 306 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm24812-201ENSMUST00000175315 284 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm28117-201ENSMUST00000188472 371 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm3678-201ENSMUST00000218888 492 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm39041-201ENSMUST00000205557 3902 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 AC156025.3-201ENSMUST00000225919 3095 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Scn3aA2ASI5 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Scn3aA2ASI5 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.93□□□□□ -1.14
Scn3aA2ASI5 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.93□□□□□ -1.14
Scn3aA2ASI5 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.93□□□□□ -1.14
Scn3aA2ASI5 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Scn3aA2ASI5 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.93□□□□□ -1.14
Scn3aA2ASI5 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.93□□□□□ -1.14
Scn3aA2ASI5 Gm7019-201ENSMUST00000194122 369 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms