Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm14891-201ENSMUST00000117378 596 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm11810-201ENSMUST00000118311 333 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm6382-201ENSMUST00000118873 942 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm4785-201ENSMUST00000191025 751 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm37270-201ENSMUST00000194277 330 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm7285-201ENSMUST00000198801 580 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm43812-202ENSMUST00000202701 581 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm22865-201ENSMUST00000083949 214 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm15481-201ENSMUST00000120264 539 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm9697-201ENSMUST00000147052 997 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm23392-201ENSMUST00000157580 113 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm24782-201ENSMUST00000157641 132 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm18690-201ENSMUST00000204488 985 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm45446-201ENSMUST00000209348 216 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.81□□□□□ -1.32
Trim3Q9R1R2 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.81□□□□□ -1.32
Trim3Q9R1R2 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms