Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm42676-201ENSMUST00000197609 2686 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm25757-201ENSMUST00000103986 123 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm25631-201ENSMUST00000104390 130 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm15159-201ENSMUST00000117062 764 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm13240-201ENSMUST00000120042 565 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm23259-201ENSMUST00000158318 303 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm2976-201ENSMUST00000160362 513 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm6434-201ENSMUST00000163316 372 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm11107-201ENSMUST00000165414 505 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm27026-201ENSMUST00000183003 892 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm36997-201ENSMUST00000195090 707 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm45198-201ENSMUST00000206796 591 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 AC134860.4-201ENSMUST00000223592 978 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm5250-201ENSMUST00000059065 321 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm10108-201ENSMUST00000078246 319 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm2136-201ENSMUST00000193945 2577 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 AC160637.1-201ENSMUST00000214037 3887 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.34□□□□□ -1.07
Clp1Q99LI9 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clp1Q99LI9 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Clp1Q99LI9 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Clp1Q99LI9 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Clp1Q99LI9 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.34□□□□□ -1.08
Clp1Q99LI9 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
Clp1Q99LI9 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Clp1Q99LI9 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Clp1Q99LI9 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.33□□□□□ -1.08
Clp1Q99LI9 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Clp1Q99LI9 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms